Organization
Undergraduate School School of Agriculture Associate Professor
Title
Associate Professor
Other name(s)
Suzuki Hiromi
External link
Degree
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理学博士
Research Areas
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Life sciences / Biophysics / 生物物理学(Biophysics)
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Life sciences / Molecular biology / 分子生物学(Molecular Biology)
Education
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Tokyo University of Science Graduate School, Division of Science and Engineering
1985.4 - 1988.3
Country/Region： Japan
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Tokyo University of Science Graduate School, Division of Science and Technology
1983.4 - 1985.3
Country/Region： Japan
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Tokyo University of Science Faculty of Science
1979.4 - 1983.3
Country/Region： Japan
Professional Memberships
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日本蛋白工学会
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日本分子生物学会
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日本生物物理学会
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情報知識学会
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日本バイオインフォマティクス学会
Papers
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Malic enzyne, not malate dehydrogenase, mainly oxidizes malate that originates from the tricarboxylic acid cycle in cyanobacteria Reviewed
Noriaki Katayama, Kaori Iwazumi, Hiromi Suzuki, Takashi Osanai, Shoki Ito
mBio 13 ( 6 ) 2022.12
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Shuji Takemoto
Bulletin of the Faculty of Agriculture, Meiji University 56 ( 4 ) 209-227 - 227 2007.3
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遺伝的アルゴリズムを用いた edge strand とcentral strand の判別法の開発
鈴木博実
明治大学農学部研究報告 55 ( 4 ) (159-168) 2006.3
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Development of a new method for evaluating the distance between duble-stranded cirlular genomes based on the gene arrangements
Tomohide Matsunaga and Hiromi Suzuki
Bulletin of school of agriculture ( 139 ) (1-13) 2004.9
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A procedure for Detecting Similarity between Distantly Related Protein-Families
H. Suzuki, S. Fukuchi, K. Horimoto
In Begehr, H.G.W., Gilbert, R.P. and Kajiwara, J.(eds)Proceedings of Second International Congress ISAAC 2 1275-1283 2000.3
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A bacteriophage T4 DNA/Protein sequence database available on the WWW
H.Suzuki, F. Arisaka, E. Kutter, E. Thomas, A. Tsugita, T. Kunisawa
Res. Commum. Biochem. Cell&Molec. Biol. 2 309-322 1998
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学生の実態を考慮した農学における情報教育
私立大学情報教育協会私情教ジャーナル 5 ( 4 ) 18-19 1997.3
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ゲノム情報ワークショップでのワークステーション発表｢An attempt to integrate various database using an object-oriented database management system ｣
1994.12
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Protein variant database:data interchangeable with the protein sequence database and nonsequence database
A.Ubasawa, H.Suzuki, N.Miyatake, F.Okibayashi, L.Lunjiang, K.Imai, K.Satake, A.Tsugita
1993.5
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Protein variant database:data interchangeable with the protein sequence database and nonsequence database
A.Ubasawa*, H.Suzuki, N.Miyatake*, F.Okibayashi*, L.Lunjiang*, K.Imai*, K.Satake*, A.Tsugita*
Prot. Engineer. Springer-Verlag 6 1026 1993.5
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Protein Sequence Database Query System : 'TOPIQUS'
SUZIKI Hiromi, IWASAKI Masahide, KATOH Hiroaki
The Journal of Information Science and Technology Association 42 ( 10 ) 954-956 - 956 1992
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Principal Component Analysis to Detect the Similarity of Distantly Related Proteins : Its Application to Cytochromes c, c1 and f.
K.Horimoto*, H.Suzuki, J.Otsuka*
Protein Sequence & Data Analysis 4 33-42 1991
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A protein secondary structure (PSS) database
H.Suzuki, A.S.Kolaskas*, S.L.Samuel*, J.Otsuka*, A.Tsugita*
Springer-VerlagProtein Seq Data Anal. 4 97-104 1991
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Discrimination between adaptive and nuetral amino acid substitutions in vertebrate hemoglobins
K.Horimoto, H.Suzuki, J.Otsuka
Springer-VerlagJ. Mol. Evol. 31 302-324 1990
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Study on Evolution by using of protein Databases
79-88 1990
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Regulation in the synthesis of Escherichia coli RNA polymerase proposed from sequence analysis
J.Otsuka*, H.Suzuki, T.Kunisawa*
Springer-VerlagProtein Sequence & Data Analysis 1 355-361 1988
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Theoretical analysis of single-round transcription experiments on trp leader region
H.Suzuki, T.Kunisawa, J.Otsuka
Biophysical SocietyBiophysical Journal 51 407-412 1987
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Theoretical evaluation of transcriptional pausing effect on trp leader sequence
H.Suzuki, T.Kunisawa, J.Otsuka
Biophysical SocietyBiophysical Journal 49 425-435 1986
Books
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Improvement of Computational Environment in protein Engineering no.
（ Role： Joint author）
1993
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The Present condition and Tendency of Computer utilization in protein Engineering no.
（ Role： Joint author）
1992
Presentations
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Analysis of Cα distances between adjacent strands in β-sheetsβ
〇Hiromi Suzuki
The 59th Annual Meeting of the Biophysical Society of Japan 2021.11 Biophysical Society of Japan
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Search for the evolutionary origin of α-tocopherol protein
〇Shin YATAKE, Yori MASUZAWA-OZAKI, Hiromi SUZUKI, Asako, TAKENAKA
2021.3
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Effect of disulfide bonds on the β-sheets is dependent on protein environment
The 42nd Annual Meeting of the Molecular Biology Society of Japan 2019.12 Molecular Biology Society of Japan
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The effect of disulfide bonds on anti-parallel β-sheets on secreted protein folding
The 57th Annual Meeting of the Biophysical Society of Japan (BSJ2019) 2019.9 Biophysical Society of Japan
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Effect of disulfide bonds on the secondary structure assembly
The 41st Annual Meeting of the Molecular Biology Society of Japan 2018.11 The Molecular Biology Society of Japan
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Do disulfide bonds relate to β-strnad assembly in anti-parallel manner ?
The 56th Annual Meeting of the Biophysical Society of Japan 2018.9 The Biophysical Society of Japan
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Analysis of alignment patterns of amino acid triplets located on adjacent β-strands
H. Suzuki
Consortium of Biological Sciences 2017 2017.12
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Cys-Cys pairs on the strands arranged adjacently are preferred in β-sheets
H. Suzuki
The 55th Annual Meeting of the Biophysical Society of Japan 2017.9 Biophysical Society of Japan
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The presence of α-helices between β-strands has effect not only on forming parallel pairing but also on β-strand pairing propensity.
The 39th Annual Meeting of the Molecular Biology Society of Japan 2016.12 Molecular Biology Society of Japan
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Analysis of amino acid triplet patterns in β-sheets
The 54th Annual Meeting of the Biophysical Society of Japan 2016.11 Biophysical Society of Japan
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Alignment patters of amino acid triplets in β-sheets have accurate preference not only for combination of amino acid residues byt also for hydrogen bonding formation
BMB2015 2015.12 Molecular Biology Society of Japan / The Japanese Biochemical Society
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The effect of α-helices on β-strand pairing propensity
The 53rd Annual Meeting of the Biophysical Society of Japan 2015.9 The Biophysical Society of Japan
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Different amino acid pairing propensity in edge and central strands affect β-sheet order
The 37th Anuual Meeting of the Molecular Biology Society of Japan 2014.11 Molecular Biology Society of Japan
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Pairing propensity in β-sheets is quite deffent between edge and central strands
The 52nd Annual Meeting of the Biophysical Society of Japan 2014.9 The Biophysical Society of JApan
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The effect of differences in amino acid sequence and propensity in edge and central region on the β-sheet formation
Shuhei Watabe
The 36th Anuual Meeting of the Molecular Biology Society of Japan 2013.12 Molecular Biology Society of Japan
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Edge and central strands show a different prosensity for pairing partneres
The 51st Annual Meeting of the Biophysical Sociery of Japan 2013.10 Biophysical Society of Japan
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The role of Edge strand discrimination on Prediction of β-sheet formation
Shuhei Watabe
The 35th Anuual Meeting of the Molecular Biology Society of Japan 2012.12 Molecular Biology Society of Japan
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How do β-strands determine their positions in β-sheets ?
The 50th Annual Meeting of the Biophysical Sociery of Japan 2012.9 Biophysical Society of Japan
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Amino acid pairing propensity plays an important role for β-strand alignment in anti-parallel sheets more than in parallel sheets
The 34th Anuual Meeting of the Molecular Biology Society of Japan 2011.12 Molecular Biology Society of Japan
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Development of prediction method for β-sheet formation using amino acid pairing propensity (2)
The 49th Annual Meeting of the Biophysical Sociery of Japan 2011.9 Biophysical Society of Japan
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Role of amino acid pairing propensity on β-sheet formation
BMB2010 Biochemistry and Molecular Biology 2010.12
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Development of prediction method for β-sheet formation using amino acid pairing propensity
The 48th Annual Meeting of the Biophysical Society of Japan 2010.9 Biophicial SOciety of Japan
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Role of amino acid pairing propensity on determination of strand order in β-sheets
Kotaro Tajima
The 32nd Anuual Meeting of the Molecular Biology Society of Japan 2009.12 Molecular Biology Society of Japan
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Effect of amino acid pairing propensity on β-strand order in the β-sheets
The 47th Annual Meeting of the Biophysical Society of Japan 2009.11 日本生物物理学会
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βシート形成におけるペア選択傾向の役割
田島 耕太郎
第３１回日本分子生物学会年会・第８１回日本生化学会大会 合同大会 2008.12
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β strand 配置決定における残基ペア選択傾向の役割
第４６回日本生物物理学会年会 2008.12 日本生物物理学会
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Development of prediction method for β stand register using stastical thory
2007.12
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統計的手法を用いた逆平行および平行βsheet 中でのstrand ペア形成予測法の開発
第３０回日本分子生物学会年会・第８０回に本生化学会大会 2007.12
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Development of a method classifying edge strands from central strands
20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress 2006.6
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βシートの端に位置するβストランドと中央部に位置するβストランドとの識別
第２８回日本分子生物学会年会 2005.12 日本分子生物学会
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Molecular phylogenetic analysis of proteins associated in energy metabolism
◎T.Tomiki*, N.Saitou*, H.Suzuki(専任講師)
2001.11
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エネルギー代謝に関する蛋白質の分子系統学的解析
◎富木毅*, 斉藤成也*, 鈴木博実(専任講師)
2001.7
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A procedure for detecting similarity between distantly related protein families
◎Hiromi Suzuki(専任講師), Katsuhisa Horimoto*(Saga Medical School・助教授)
1999.8
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"Molecular evolution of flagellar proteins,FlgB,C,E,F and G"
1998.12
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Sequence analysis and molecular evolution among the SKI2 subfamily helicases from Saccharomyces cerevisiae
1998.12
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A Genomic Database of Bacteriophage T4 : Comparison of Codon Usage Preferences in Phage-Host Systems
"T.Kunisawa, H.Suzuki, F.Arisaka, E.Kutter, A.Tsugita"
1998.11
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TOPIQUS a Multidatabase Retrieval System
Hiromi Suzuki and Hiroaki Katoh
15th International CODATA Conference 1996.10
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Protein variant database
1993.5
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蛋白質DB検索システムTOPIQUS｣
鈴木博実, 加藤博章
ドクメンテーション･シンポジウム 1992.6
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蛋白質二次構造データベース
鈴木博実, 大塚仁也, 次田皓
第２回日本蛋白工学会年会 1990.5
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アテニュエイション機構による大腸菌ピリミジンde novo 合成オペロンの転写制御
鈴木博実, 国沢隆, 大塚仁也
日本生物物理学会第２６回年会 1988.10
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E. coli RNA ポリメラーゼ発現の転写調節について
鈴木博実, 国沢隆, 大塚仁也
日本生物物理学会第２５回年会 1987.10
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アテニュエイション機構によるアミノ酸合成オペロンの転写制御
鈴木博実, 国沢隆, 大塚仁也
日本生物物理学会第２４回年会 1986.10
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リーダーシークエンスでの転写一時停止のアテニュエイション機構における役割
鈴木博実, 国沢隆, 大塚仁也
日本生物物理学会第２３回年会 1985.9
Research Projects
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蛋白質の機能と構造
Grant type：Competitive
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転写発現制御機構
Grant type：Competitive
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分子進化
Grant type：Competitive
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