Analysis of functional xylanases in xylan degradation by Aspergillus niger E-1 and characterization of the GH family 10 xylanase XynVII

Yui Takahashi, Hiroaki Kawabata, Shuichiro Murakami

SpringerPlus   2 ( 1 )   1 - 11   2013

Fe-superoxide dismutase and 2-hydroxy-1,4-benzoquinone reductase preclude the auto-oxidation step in 4-aminophenol metabolism by Burkholderia sp. strain AK-5

Shinji Takenaka, Jyun Koshiya, Susumu Okugawa, Akiko Takata, Shuichiro Murakami, Kenji Aoki

BIODEGRADATION   22 ( 1 )   1 - 11   2011.2

Molecular Cloning and Sequence Analysis of Two Distinct Halotolerant Extracellular Proteases from Bacillus subtilis FP-133

Shinji Takenaka, Nobutaka Yoshida, Ken-ichi Yoshida, Shuichiro Murakami, Kenji Aoki

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY   75 ( 1 )   148 - 151   2011.1

Expression and characterization of a fusion protein-containing cyclodextrin glycosyltransferase from Paenibacillus sp. A11

Journal of Basic Microbiology   50   1-9   2010

Gene cloning and characterization of a deaminase from the 4-amino-3-hydroxybenzoate-assimilating Bordetella sp.strain 10d

Shinji Takenaka, Tomomi Sato, Jyun Koshiya, Shuichiro Murakami, Kenji Aoki

FEMS MICROBIOLOGY LETTERS   298 ( 1 )   93 - 98   2009.9

Purification and Characterization of an Extracellular Laccase from Phlebia radiata Strain BP-11-2 That Decolorizes Fungal Melanin

Shuji Kaneko, Minyi Cheng, Hiroshi Murai, Shinji Takenaka, Shuichiro Murakami, Kenji Aoki

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY   73 ( 4 )   939 - 942   2009.4

Purification and characterization of an eggshell membrane decomposing protease from Pseudomonas aeruginosa strain ME-4

Minyi Cheng, Shinji Takenaka, Shunsuke Aoki, Shuichiro Murakami, Kenji Aoki

JOURNAL OF BIOSCIENCE AND BIOENGINEERING   107 ( 4 )   373 - 378   2009.4

Gene cloning and characterization of arylamine N-acetyltransferase from Bacillus cereus strain 10-L-2

Shinji Takenaka, Minyi Cheng, Mulyono, Atsushi Koshiya, Shuichiro Murakami, Kenji Aoki

JOURNAL OF BIOSCIENCE AND BIOENGINEERING   107 ( 1 )   27 - 32   2009.1

Purification and characterization of five alkaline, thermotolerant, and maltotetraose-producing alpha-amylases from Bacillus halodurans MS-2-5, and production of recombinant enzymes in Escherichia coli

Shuichiro Murakami, Kenji Nagasaki, Haruka Nishimoto, Ryo Shigematu, Jun Umesaki, Shinji Takenaka, Jarunee Kaulpiboon, Manchumas Prousoontorn, Tipaporn Limpaseni, Piamsook Pongsawasdi, Kenji Aoki

ENZYME AND MICROBIAL TECHNOLOGY   43 ( 4-5 )   321 - 328   2008.10

Purification, characterization, and gene cloning of Ceriporiopsis sp strain MD-1 peroxidases that decolorize human hair melanin

Kenji Nagasaki, Masaro Kumazawa, Shuichiro Murakami, Shinji Takenaka, Kenzo Koike, Kenji Aoki

APPLIED AND ENVIRONMENTAL MICROBIOLOGY   74 ( 16 )   5106 - 5112   2008.8

Purification and characterization of two alkaline, thermotolerant alpha-amylases from Bacillus halodurans 38C-2-1 and expression of the cloned gene in Escherichia coli Reviewed

Shuichiro Murakami, Haruka Nishimoto, Yosuke Toyama, Etsuko Shimamoto, Shinji Takenaka, Jarunee Kaulpiboon, Manchumas Prousoontorn, Tipaporn Limpaseni, Piamsook Pongsawasdi, Kenji Aoki

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY   71 ( 10 )   2393 - 2401   2007.10

Isolation and characterization of thermotolerant bacterium utilizing ammonium and nitrate ions under aerobic conditions

Shinji Takenaka, Qi Zhou, Ampin Kuntiya, Phisit Seesuriyachan, Shuichiro Murakami, Kenji Aoki

BIOTECHNOLOGY LETTERS   29 ( 3 )   385 - 390   2007.3

Metabolism of azo dyes by Lactobacillus casei TISTR 1500 and effects of various factors on decolorization

Phisit Seesuriyachan, Shinji Takenaka, Ampin Kuntiya, Srikarnjana Klayraung, Shuichiro Murakmi, Kenji Aoki

WATER RESEARCH   41 ( 5 )   985 - 992   2007.3

Adaptation of Pseudomonas sp strain 7-6 to quaternary ammonium compounds and their degradation via dual pathways

Shinji Takenaka, Takashi Tonoki, Kazuya Taira, Shuichiro Murakami, Kenji Aoki

APPLIED AND ENVIRONMENTAL MICROBIOLOGY   73 ( 6 )   1797 - 1802   2007.3

Screening and characterization of bacteria that can utilize ammonium and nitrate ions simultaneously under controlled cultural conditions

Qi Zhou, Shinji Takenaka, Shuichiro Murakami, Phisit Seesuriyachan, Ampin Kuntiya, Kenji Aoki

JOURNAL OF BIOSCIENCE AND BIOENGINEERING   103 ( 2 )   185 - 191   2007.2

Bacillus cereus strain 10-L-2 produces two arylamine N-acetyltransferases that transform 4-phenylenediamine into 4-aminoacetanilide

Mulyono, Shinji Takenaka, Yasuhiro Sasano, Shuichiro Murakami, Kenji Aoki

JOURNAL OF BIOSCIENCE AND BIOENGINEERING   103 ( 2 )   147 - 154   2007.2

Cloning and expression of cyclodextrin glycosyltransferase gene from Paenibacillus sp. T16 isolated from hot spring soil in northern Thailand

Journal of Biochemistry and Molecular Biology   40 ( 3 )   333-340   2007

Metabolism of 4-amino-3-hydroxybenzoic acid by Bordetella sp strain 10d: A different modified meta-cleavage pathway for 2-aminophenols

Chika Orii, Shinji Takenaka, Shuichiro Murakami, Kenji Aoki

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY   70 ( 11 )   2653 - 2661   2006.11

Microbial transformation of aniline derivatives: Regioselective biotransformation and detoxification of 2-phenylenediamine by Bacillus cereus strain PDa-1

Shinji Takenaka, Mulyono, Yasuhiro Sasano, Yuka Takahashi, Shuichiro Murakami, Kenji Aoki

JOURNAL OF BIOSCIENCE AND BIOENGINEERING   102 ( 1 )   21 - 27   2006.7

Constitutive expression of catABC genes in the aniline-assimilating bacterium Rhodococcus species AN-22: production, purification, characterization and gene analysis of CatA, CatB and CatC

E Matsumura, M Sakai, K Hayashi, S Murakami, S Takenaka, K Aoki

BIOCHEMICAL JOURNAL   393 ( 1 )   219 - 226   2006.1

Purification and characterization of two novel halotolerant extracellular proteases from Bacillus subtilis strain FP-133

Bioscience, Biotechnology, and Biochemistry   70 ( 2 )   433-440   2006

Purification and characterization of a halotolerant intracellular protease from Bacillus subtilis strain FP-133

Endang Setyorini, Young-Ju Kim, Shinji Takenaka, Shuichiro Murakami, Kenji Aoki

JOURNAL OF BASIC MICROBIOLOGY   46 ( 4 )   294 - 304   2006

Constitutive synthesis of enzymes involved in 2-aminophenol metabolism and inducible synthesis of enzymes involved in benzoate, p-hydroxybenzoate, and protocatechuate metabolism in Pseudomonas sp. strain AP-3

Bioscience, Biotechnology, and Biochemistry   69 ( 5 )   1033-1035   2005

A novel coupled enzyme assay reveals an enzyme responsible for the deamination of a chemically unstable intermediate in the metabolic pathway of 4-amino-3-hydroxybenzoic acid in Bordetella sp strain 10d

C Orii, S Takenaka, S Murakami, K Aoki

EUROPEAN JOURNAL OF BIOCHEMISTRY   271 ( 15 )   3248 - 3254   2004.8

Cloning of a gene encoding 4-amino-3-hydroxybenzoate 2,3-dioxygenase from Bordetella sp 10d

S Murakami, Y Sawami, S Takenaka, K Aoki

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   314 ( 2 )   489 - 494   2004.2

Purification, characterization, and gene cloning of cis,cis-muconate cycloisomerase from benzamide-assimilating Arthrobacter sp BA-5-17

S Murakami, C Kohsaka, T Okuno, S Takenaka, K Aoki

FEMS MICROBIOLOGY LETTERS   231 ( 1 )   119 - 124   2004.2

Constitutive synthesis, purification, and characterization of catechol 1,2-dioxygenase from the aniline-assimilating bacterium Rhodococcus sp. AN-22

Journal of. Bioscience and Bioengineering   98 ( 2 )   71-76   2004

The metabolic pathway of 4-aminophenol in Burkholderia sp strain AK-5 differs from that of aniline and aniline with C-4 substituents

S Takenaka, S Okugawa, M Kadowaki, S Murakami, K Aoki

APPLIED AND ENVIRONMENTAL MICROBIOLOGY   69 ( 9 )   5410 - 5413   2003.9

Cloning and functional analysis of aniline dioxygenase gene cluster, from Frateuria species ANA-18, that metabolizes aniline via an ortho-cleavage pathway of catechol.

Bioscience Biotechnology Biochemistry   67 ( 11 )   2351-2358   2003

A novel meta-cleavage dioxygenase that cleaves a carboxyl-group substituted 2-aminophenol - Purification and characterization of 4-amino-3-hydroxybenzoate 2,3-dioxygenase from Bordetella sp strain 10d

S Takenaka, T Asami, C Orii, S Murakami, K Aoki

EUROPEAN JOURNAL OF BIOCHEMISTRY   269 ( 23 )   5871 - 5877   2002.12

Isolation and culture conditions of a Klebsiella pneumoniae strain that can utilize ammonium and nitrate ions simultaneously with controlled iron and molybdate ion concentrations.

Bioscience, Biotechnology, and Biochemistry   66 ( 5 )   996-1001   2002

Ammonia assimilation in Klebsiella pneumoniae F-5-2 that can utilize ammonium and nitrate ions simultaneously: purification and characterization of glutamate dehydrogenase and glutamine synthetase.

Journal of Bioscience and Bioengineering   93 ( 6 )   584-588   2002

日本におけるバイオレメディエーションの現状と今後の展望

生物工学会誌   81 ( 3 )   2002

Isolation of a benzoate-utilizing Pseudomonas strain from soil and production of catechol from benzoate by transpositional mutants.

Microbiological Research   156 ( 2 )   151-158   2001

Production of catechol from benzoate by the wild strain Ralstonia species Ba-0323 and characterization of its catechol 1,2-dioxygenase.

Bioscience, Biotechnology, and Biochemistry   65 ( 9 )   1957-1964   2001

Regulation by two CatR proteins that differ in binding affinity to catB promoters expressing two cat gene clusters.

Bioscience, Biotechnology, and Biochemistry   65 ( 10 )   2146-2153   2001

Complete nucleotide sequence and functional analysis of the genes for 2-aminophenol metabolism from Pseudomonas sp. AP-3.

Archives of Microbiology   174 ( 4 )   265-272   2000

Genetic characteristics of cellulose-forming acetic acid bacteria identified phenotypically as Gluconacetobacter xylinus

Bioscience, Biotechnology, and Biochemistry   64 ( 4 )   757-760   2000

Cloning of a gene hydroxyquinol 1,2-dioxygenase that catalyzes both intradiol and extradiol ring cleavage of catechol.

Bioscience, Biotechnology, and Biochem.istry   63 ( 5 )   859-865   1999

Reclassification of the strains with low G+C contents of DNA belonging to the genus Gluconobacter ASAI 1935 (Acetobacteraceae).

Bioscience, Biotechnology, and Biochemistry   63 ( 6 )   989-992   1999

Cloning and sequence analysis of two catechol-degrading gene clusters from the aniline-assimilating bacterium Frateuria species ANA-18.

Gene   226 ( 2 )   189-198   1999

Purification and characterization of two muconate cycloisomerase isozymes from aniline-assimilating Frateuria species ANA-18.

Bioscience, Biotechnology, and Biochemistry   62 ( 6 )   1129-1133   1998

Purification and characterization of four catechol 1,2-dioxygenase isozymes from the benzamide-assimilating bacterium Arthrobacter species BA-5-17

Microbiological Research   153 ( 2 )   163-171   1998

Metabolism of 2-aminophenol by Pseudomonas sp. AP-3 : modified meta-cleavage pathway.

Archives of Microbiology   170 ( 2 )   132-137   1998

Purification, characterization, and gene analysis of catechol 2,3-dioxygenase from the aniline-assimilating bacterium Pseudomonas species AW-2.

Bioscience, Biotechnology, and Biochemistry   62 ( 4 )   747-752   1998

Purification and characterization of muconate cycloisomerase from aniline-assimilating Rhodococcus erythropolis AN-13.

Journal of Fermentation and Bioengineering   85 ( 5 )   521-524   1998

A high level of accumulation of 2-hydroxymuconic 6-semialdehyde from aniline by the transpositional mutant Y-2 of Pseudomonas species AW-2.

Microbiological Research   152 ( 2 )   129-135   1997

Classification of catechol 1,2-dioxygenase family : sequence analysis of a gene for the catechol1,2-dioxygenase showing high specificity for methylcatechols from Gram positive aniline-assimilating Rhodococcus erythropolis AN-13.

Gene   185 ( 1 )   49-54   1997

Partial punification and characterization of a bacterial dioxygenase that catalyzes the ring fission of 2-aminophenol.

Microbiological Research   152 ( 1 )   33-38   1997

Production of methy-, dimethyl, ethyl, chloro-, fluoro-and hydroxyl derivatives of catechol from thirteen aromatic amines by the transcriptional mutant B-9 of the aniline-assimilating Pseudomonas species AW-2

Journal of Fermentation and Bioengineering   84 ( 3 )   232-235   1997

Novel genes encoding 2-aminophenol 1,6-dioxygenase from Pseudomonas species AP-3 growing on 2-aminophenol and catalytic properties of the purified enzyme.

Journal of Biological Chemistry   272 ( 23 )   147271-14732   1997

Production of catechol by transpositional mutants of aniline-assimilating Pseudomonas species AW-2

Journal of Fermentation and Bioengineering   82 ( 5 )   480-483   1996

Anaerobic synthesis of extracellular proteases by the soil bacterium Bacillus sp. AM-23 : purification and characterization of the enzymes

Soil Biology and Biochemistry   27 ( 11 )   1377-1382   1995

Nitrate reduction in Bacillus licheniformis in the presence of ammonium salt by shaking culture

Bioscience, Biotechnology, and Biochemistry   57 ( 7 )   1082-1086   1993

Increase in nitrate reductase activity with ammonium chloride in Bacillus licheniformis by shaking culture

Bioscience, Biotechnology, and Biochemistry,   57 ( 12 )   2170-2171   1993

Induction, purification, and characterization of catechol 2, 3-dioxygenase from aniline-assimilating Pseudomonas sp. FK-8-2

Agricultural Biological Chemistry   55 ( 5 )   1281-1289   1991

Catechol 1,2-dioxygenase isozymes in soil bacteria metabolizing aromatic compounds.

Soil Biology and Biochemistry   23 ( 9 )   815-819   1991

Microbial metabolism of aniline through a meta-cleavage pathway : isolation of strains and production of cateohol 2, 3-dioxygenase.

Agricultural Biological Chemistry   54 ( 1 )   205-206   1990